PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Glyma.07G197300.1.p
Common NameGLYMA_07G197300, LOC100810793
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 172aa    MW: 19271 Da    PI: 9.5171
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Glyma.07G197300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-11960255
                         HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                  HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55
                         r+  + +E++RR+++++ f++L +++P++   +s+   s  +   +A++YIk+Lq
  Glyma.07G197300.1.p  9 RTDTKSIEQNRRNQMKDLFSKLNSVVPHQ---SSRDaTSRPDKIGEATNYIKNLQ 60
                         677789**********************7...45555999999***********9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-12572IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.14E-6564No hitNo description
PROSITE profilePS5088810.785759IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.7E-8960IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-11973IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-61365IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MENNPSSSRT DTKSIEQNRR NQMKDLFSKL NSVVPHQSSR DATSRPDKIG EATNYIKNLQ  60
IKLEKMKEKR NNLIDIERSK NASMNMGLKS PQFKIQQMGS ALEIVLVTGM DCQFMFNETI  120
RVLQEEGSDI VNASYTVVEN AVFHTIHCQV GGSANGALRI SEKIKKYLNG C*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150342e-95AP015034.1 Vigna angularis var. angularis DNA, chromosome 1, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003528456.21e-125PREDICTED: uncharacterized protein LOC100810793
TrEMBLA0A0R0JBH01e-125A0A0R0JBH0_SOYBN; Uncharacterized protein
STRINGGLYMA07G31710.21e-107(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Representative plantOGRP13451147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.15e-43bHLH family protein